Keywords
The key words “MUST”, “MUST NOT”, “SHOULD”, etc. are to be interpreted as described in RFC 2119.
Pipelines SHOULD have excellent documentation.
Repositories SHOULD have GitHub Topics set on the nf-core repository.
Rationale
GitHub Topics are shown on the nf-core website and used for categorisation and searching. They are important for workflow visibility and findability.
Topics MAY be related to the workflow, tools, data or any related aspect.
- Get started
- Running
- Overview
- Advanced topics
- Configuration
- Reference genomes
- Running pipelines offline
- Developing
- Overview
- Containers
- Documentation
- Institutional profiles
- Migration guides
- Testing
- Contributing
- Overview
- Components
- Contribution types
- Contributor's list
- Deprecating modules
- Documentation
- Existing pipelines
- New pipelines
- Project proposals
- Reviewing pull requests
- nf-core bot
- Review checklists
- Reviewing pipeline releases
- Specifications
- Community
- Advisories
- Governance
- Terminology
- nf-core/tools
- API
- CLI
- Installation
- Test datasets
- TUI