List pipelines

The nf-core pipelines list command shows all available nf-core pipelines with their latest version, publication date, and when you last pulled the pipeline locally.

Example output:

nf-core pipelines list

Supply one or more keywords to filter pipelines by titles, descriptions, and topics:

nf-core pipelines list rna rna-seq

Sort results by latest release (-s release, default), when you last pulled a local copy (-s pulled), alphabetically (-s name), or by number of GitHub stars (-s stars).

nf-core pipelines list -s stars

To return results as JSON output for downstream use, use the --json flag.

Archived pipelines are not returned by default. To include them, use the --show_archived flag.